Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC175P0C221 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC175P0C221 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC175P0C221 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC175P0C221 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC175P0C221 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC175P0C221 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 MCCD1P2-201ENST00000423228 335 ntBASIC16.28■□□□□ 0.2
CCDC175P0C221 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC175P0C221 SERBP1P3-201ENST00000459980 809 ntBASIC16.28■□□□□ 0.2
CCDC175P0C221 TMEM198B-204ENST00000484016 896 ntBASIC16.28■□□□□ 0.2
CCDC175P0C221 AC004066.1-201ENST00000502488 802 ntBASIC16.28■□□□□ 0.2
CCDC175P0C221 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC175P0C221 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC175P0C221 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
CCDC175P0C221 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC175P0C221 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC175P0C221 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC175P0C221 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC175P0C221 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 CICP20-201ENST00000443330 2801 ntBASIC16.27■□□□□ 0.2
CCDC175P0C221 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC175P0C221 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC175P0C221 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 LINC01115-203ENST00000606068 577 ntBASIC16.27■□□□□ 0.2
CCDC175P0C221 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 C20orf181-201ENST00000623918 480 ntBASIC16.27■□□□□ 0.2
CCDC175P0C221 AL033527.5-202ENST00000641632 1098 ntBASIC16.27■□□□□ 0.2
CCDC175P0C221 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC175P0C221 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC175P0C221 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
CCDC175P0C221 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC175P0C221 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC175P0C221 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC175P0C221 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC175P0C221 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC175P0C221 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC175P0C221 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCDC175P0C221 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC175P0C221 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC175P0C221 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC175P0C221 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC175P0C221 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC175P0C221 AC012617.1-204ENST00000586340 2305 ntBASIC16.27■□□□□ 0.19
CCDC175P0C221 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC175P0C221 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC175P0C221 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC175P0C221 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC175P0C221 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC175P0C221 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC175P0C221 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC175P0C221 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC175P0C221 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC175P0C221 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms