Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC114947.1-202ENST00000514136 344 ntBASIC15.73■□□□□ 0.11
RB1P06400 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RB1P06400 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.73■□□□□ 0.11
RB1P06400 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RB1P06400 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.73■□□□□ 0.11
RB1P06400 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.73■□□□□ 0.11
RB1P06400 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 AL132780.4-201ENST00000624870 1135 ntBASIC15.73■□□□□ 0.11
RB1P06400 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.73■□□□□ 0.11
RB1P06400 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RB1P06400 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RB1P06400 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RB1P06400 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RB1P06400 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.72■□□□□ 0.11
RB1P06400 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 KRT8P31-201ENST00000504812 1408 ntBASIC15.72■□□□□ 0.11
RB1P06400 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 Z69890.1-201ENST00000382990 339 ntBASIC15.72■□□□□ 0.11
RB1P06400 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RB1P06400 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RB1P06400 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.72■□□□□ 0.11
RB1P06400 AL807761.2-201ENST00000422849 729 ntBASIC15.72■□□□□ 0.11
RB1P06400 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.72■□□□□ 0.11
RB1P06400 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 PIN4P1-201ENST00000451079 396 ntBASIC15.72■□□□□ 0.11
RB1P06400 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 RPL18AP3-201ENST00000462885 528 ntBASIC15.72■□□□□ 0.11
RB1P06400 AP003398.1-201ENST00000531124 318 ntBASIC15.72■□□□□ 0.11
RB1P06400 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.72■□□□□ 0.11
RB1P06400 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RB1P06400 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RB1P06400 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.72■□□□□ 0.11
RB1P06400 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.72■□□□□ 0.11
RB1P06400 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 AHCYP4-201ENST00000419201 1315 ntBASIC15.71■□□□□ 0.11
RB1P06400 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RB1P06400 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RB1P06400 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RB1P06400 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.71■□□□□ 0.11
RB1P06400 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RB1P06400 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.71■□□□□ 0.11
RB1P06400 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.71■□□□□ 0.11
RB1P06400 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.71■□□□□ 0.11
RB1P06400 KRT18P66-201ENST00000452970 1269 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms