Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CHRNA1P02708 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.18■□□□□ 0.18
CHRNA1P02708 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA1P02708 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CHRNA1P02708 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA1P02708 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA1P02708 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA1P02708 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA1P02708 AC092978.1-202ENST00000637590 1327 ntBASIC16.18■□□□□ 0.18
CHRNA1P02708 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA1P02708 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA1P02708 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 PAUPAR-201ENST00000630360 2965 ntBASIC16.17■□□□□ 0.18
CHRNA1P02708 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
CHRNA1P02708 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.17■□□□□ 0.18
CHRNA1P02708 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNA1P02708 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNA1P02708 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CHRNA1P02708 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 AC026803.1-201ENST00000569130 274 ntBASIC16.17■□□□□ 0.18
CHRNA1P02708 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA1P02708 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 MEG3_2.1-201ENST00000611456 105 ntBASIC16.17■□□□□ 0.18
CHRNA1P02708 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.17■□□□□ 0.18
CHRNA1P02708 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA1P02708 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA1P02708 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA1P02708 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA1P02708 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA1P02708 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA1P02708 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA1P02708 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA1P02708 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHRNA1P02708 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 TMBIM7P-202ENST00000641474 1516 ntBASIC16.16■□□□□ 0.18
CHRNA1P02708 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 AC007950.2-201ENST00000615045 2347 ntBASIC16.16■□□□□ 0.18
CHRNA1P02708 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 OR2K2-202ENST00000374428 1038 ntBASIC16.16■□□□□ 0.18
CHRNA1P02708 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms