Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.4□□□□□ -0.26
APOC1P02654 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.4□□□□□ -0.26
APOC1P02654 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC1P02654 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.4□□□□□ -0.26
APOC1P02654 AC092053.3-201ENST00000641308 4975 ntBASIC13.4□□□□□ -0.26
APOC1P02654 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.4□□□□□ -0.27
APOC1P02654 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
APOC1P02654 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
APOC1P02654 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
APOC1P02654 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.4□□□□□ -0.27
APOC1P02654 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 AL390755.1-201ENST00000623716 2027 ntBASIC13.39□□□□□ -0.27
APOC1P02654 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 METTL21AP1-201ENST00000438852 635 ntBASIC13.39□□□□□ -0.27
APOC1P02654 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.39□□□□□ -0.27
APOC1P02654 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.39□□□□□ -0.27
APOC1P02654 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.39□□□□□ -0.27
APOC1P02654 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 COL6A4P2-202ENST00000504443 2753 ntBASIC13.39□□□□□ -0.27
APOC1P02654 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC1P02654 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC1P02654 CICP24-201ENST00000605464 2705 ntBASIC13.39□□□□□ -0.27
APOC1P02654 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC1P02654 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
APOC1P02654 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC1P02654 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.38□□□□□ -0.27
APOC1P02654 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC1P02654 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 NUS1P3-201ENST00000423502 862 ntBASIC13.38□□□□□ -0.27
APOC1P02654 TSSK5P-201ENST00000423978 907 ntBASIC13.38□□□□□ -0.27
APOC1P02654 AC055876.3-201ENST00000431496 288 ntBASIC13.38□□□□□ -0.27
APOC1P02654 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC1P02654 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC1P02654 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.38□□□□□ -0.27
APOC1P02654 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.38□□□□□ -0.27
APOC1P02654 AC135586.1-201ENST00000539323 574 ntBASIC13.38□□□□□ -0.27
APOC1P02654 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.38□□□□□ -0.27
APOC1P02654 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms