Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.09□□□□□ -0.31
DHFRP00374 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DHFRP00374 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.09□□□□□ -0.31
DHFRP00374 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 AC079776.4-201ENST00000511039 504 ntBASIC13.09□□□□□ -0.31
DHFRP00374 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 UNC93B6-202ENST00000528242 690 ntBASIC13.09□□□□□ -0.31
DHFRP00374 AC084364.1-201ENST00000551967 1556 ntBASIC13.09□□□□□ -0.31
DHFRP00374 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.09□□□□□ -0.31
DHFRP00374 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.09□□□□□ -0.31
DHFRP00374 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.09□□□□□ -0.31
DHFRP00374 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.09□□□□□ -0.31
DHFRP00374 MIR7706-201ENST00000613747 67 ntBASIC13.09□□□□□ -0.31
DHFRP00374 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.09□□□□□ -0.31
DHFRP00374 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.09□□□□□ -0.31
DHFRP00374 REXO1L1P-201ENST00000379010 6598 ntBASIC13.09□□□□□ -0.31
DHFRP00374 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 PMS2P7-201ENST00000506558 1336 ntBASIC13.09□□□□□ -0.31
DHFRP00374 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.09□□□□□ -0.31
DHFRP00374 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DHFRP00374 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DHFRP00374 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DHFRP00374 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DHFRP00374 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
DHFRP00374 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DHFRP00374 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.08□□□□□ -0.31
DHFRP00374 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
DHFRP00374 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
DHFRP00374 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
DHFRP00374 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.08□□□□□ -0.32
DHFRP00374 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
DHFRP00374 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
DHFRP00374 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
DHFRP00374 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
DHFRP00374 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.08□□□□□ -0.32
DHFRP00374 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.08□□□□□ -0.32
DHFRP00374 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 SPTSSB-204ENST00000617024 1292 ntBASIC13.08□□□□□ -0.32
DHFRP00374 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.08□□□□□ -0.32
DHFRP00374 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.08□□□□□ -0.32
DHFRP00374 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DHFRP00374 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DHFRP00374 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms