Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
TRAF3IP2O43734 AC007686.3-201ENST00000619017 3487 ntBASIC13.4□□□□□ -0.26
TRAF3IP2O43734 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AC132938.2-201ENST00000579188 680 ntBASIC13.4□□□□□ -0.26
TRAF3IP2O43734 GNRHR2-203ENST00000581100 1187 ntBASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AC008735.3-201ENST00000596646 500 ntBASIC13.4□□□□□ -0.26
TRAF3IP2O43734 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AL591163.1-201ENST00000641757 987 ntBASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AC105233.6-201ENST00000642093 218 ntBASIC13.4□□□□□ -0.26
TRAF3IP2O43734 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AC140479.7-201ENST00000636301 2332 ntBASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAF3IP2O43734 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
TRAF3IP2O43734 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.4□□□□□ -0.27
TRAF3IP2O43734 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.4□□□□□ -0.27
TRAF3IP2O43734 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms