Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF13O43567 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RNF13O43567 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF13O43567 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.75□□□□□ -0.21
RNF13O43567 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.75□□□□□ -0.21
RNF13O43567 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF13O43567 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF13O43567 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RNF13O43567 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RNF13O43567 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RNF13O43567 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF13O43567 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
RNF13O43567 AL928921.2-201ENST00000641325 2442 ntBASIC13.75□□□□□ -0.21
RNF13O43567 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF13O43567 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
RNF13O43567 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF13O43567 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF13O43567 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF13O43567 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF13O43567 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 GNAQP1-201ENST00000444815 1067 ntBASIC13.74□□□□□ -0.21
RNF13O43567 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF13O43567 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF13O43567 AC104596.2-201ENST00000512793 793 ntBASIC13.74□□□□□ -0.21
RNF13O43567 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF13O43567 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF13O43567 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF13O43567 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms