Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 BAATP1-201ENST00000412284 1225 ntBASIC15.33■□□□□ 0.04
CAPN8A6NHC0 KLF2P2-201ENST00000416807 1039 ntBASIC15.33■□□□□ 0.04
CAPN8A6NHC0 USP32P1-208ENST00000506594 1164 ntBASIC15.33■□□□□ 0.04
CAPN8A6NHC0 KRT18P25-201ENST00000508931 1278 ntBASIC15.33■□□□□ 0.04
CAPN8A6NHC0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 MSTO2P-201ENST00000314835 1709 ntBASIC15.33■□□□□ 0.04
CAPN8A6NHC0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 AL360270.3-201ENST00000609118 1348 ntBASIC15.33■□□□□ 0.04
CAPN8A6NHC0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 KRT8P14-201ENST00000414254 1442 ntBASIC15.33■□□□□ 0.04
CAPN8A6NHC0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.32■□□□□ 0.04
CAPN8A6NHC0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 ACTBP8-201ENST00000403258 1108 ntBASIC15.32■□□□□ 0.04
CAPN8A6NHC0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.32■□□□□ 0.04
CAPN8A6NHC0 HLA-K-203ENST00000430151 1046 ntBASIC15.32■□□□□ 0.04
CAPN8A6NHC0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 AC114812.1-204ENST00000449669 728 ntBASIC15.32■□□□□ 0.04
CAPN8A6NHC0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 MIR6869-201ENST00000619434 62 ntBASIC15.32■□□□□ 0.04
CAPN8A6NHC0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN8A6NHC0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 AGAP7P-201ENST00000582299 2062 ntBASIC15.31■□□□□ 0.04
CAPN8A6NHC0 AGAP14-201ENST00000624701 2060 ntBASIC15.31■□□□□ 0.04
CAPN8A6NHC0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN8A6NHC0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms