Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 BAK1P1-201ENST00000317045 636 ntBASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 KRT17P5-201ENST00000332088 839 ntBASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC010234.1-201ENST00000494599 870 ntBASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 C2orf69P1-201ENST00000563532 1093 ntBASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 MIR5196-201ENST00000578146 115 ntBASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 MRPL37P1-201ENST00000592451 1337 ntBASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC026410.1-201ENST00000507366 1101 ntBASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC00431-202ENST00000636375 159 ntBASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 LTB4R2-202ENST00000528054 3092 ntBASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LOC102724428A0A0B4J2F2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC01815-202ENST00000641468 1409 ntBASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC009093.10-201ENST00000641956 1442 ntBASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 AL365203.3-201ENST00000609742 2057 ntBASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms