Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 KLF2P3-201ENST00000451977 1087 ntBASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC015911.4-201ENST00000588022 1070 ntBASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL844908.2-201ENST00000609461 460 ntBASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL157414.3-201ENST00000624276 1954 ntBASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 KRT8P22-201ENST00000562317 1415 ntBASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 TSEN15P1-201ENST00000423257 515 ntBASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC114501.2-201ENST00000439631 535 ntBASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC140878.1-201ENST00000565277 250 ntBASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL158212.4-201ENST00000624062 1286 ntBASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms