Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 AC007250.1-201ENST00000608934 338 ntBASIC13.59□□□□□ -0.23
CHD8Q9HCK8 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC13.59□□□□□ -0.23
CHD8Q9HCK8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 AC008021.1-201ENST00000474180 414 ntBASIC13.59□□□□□ -0.23
CHD8Q9HCK8 RN7SL523P-201ENST00000484401 298 ntBASIC13.59□□□□□ -0.23
CHD8Q9HCK8 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.59□□□□□ -0.23
CHD8Q9HCK8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 AL136172.1-201ENST00000598590 1394 ntBASIC13.59□□□□□ -0.23
CHD8Q9HCK8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHD8Q9HCK8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHD8Q9HCK8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHD8Q9HCK8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.58□□□□□ -0.23
CHD8Q9HCK8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 RN7SL340P-201ENST00000470792 296 ntBASIC13.58□□□□□ -0.24
CHD8Q9HCK8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 AC120498.7-201ENST00000562876 330 ntBASIC13.58□□□□□ -0.24
CHD8Q9HCK8 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 SIGLEC22P-201ENST00000599104 714 ntBASIC13.58□□□□□ -0.24
CHD8Q9HCK8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 IFNL3P1-201ENST00000595082 501 ntBASIC13.58□□□□□ -0.24
CHD8Q9HCK8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHD8Q9HCK8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC112504.1-201ENST00000623415 1841 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 TLE1P1-201ENST00000422965 589 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC079325.1-201ENST00000430386 857 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 CDC37P2-201ENST00000562287 1029 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms