Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.33■□□□□ 0.2
HIPK3Q9H422 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HIPK3Q9H422 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 AL359258.3-201ENST00000622910 2331 ntBASIC16.33■□□□□ 0.2
HIPK3Q9H422 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
HIPK3Q9H422 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK3Q9H422 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 CTBP2P4-201ENST00000513884 920 ntBASIC16.32■□□□□ 0.2
HIPK3Q9H422 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 AC007881.3-201ENST00000608897 607 ntBASIC16.32■□□□□ 0.2
HIPK3Q9H422 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 AC132872.4-202ENST00000622924 2756 ntBASIC16.32■□□□□ 0.2
HIPK3Q9H422 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.32■□□□□ 0.2
HIPK3Q9H422 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK3Q9H422 AC105917.1-201ENST00000506637 2539 ntBASIC16.32■□□□□ 0.2
HIPK3Q9H422 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 AC025271.4-201ENST00000621477 1726 ntBASIC16.31■□□□□ 0.2
HIPK3Q9H422 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 MEG3_2.1-201ENST00000611456 105 ntBASIC16.31■□□□□ 0.2
HIPK3Q9H422 LINC01783-202ENST00000614408 828 ntBASIC16.31■□□□□ 0.2
HIPK3Q9H422 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 BX284668.2-205ENST00000619677 828 ntBASIC16.31■□□□□ 0.2
HIPK3Q9H422 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIPK3Q9H422 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 AC010491.1-201ENST00000563101 2797 ntBASIC16.31■□□□□ 0.2
HIPK3Q9H422 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK3Q9H422 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIPK3Q9H422 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.3■□□□□ 0.2
HIPK3Q9H422 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.3■□□□□ 0.2
HIPK3Q9H422 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HIPK3Q9H422 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIPK3Q9H422 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.3■□□□□ 0.2
HIPK3Q9H422 AC012508.2-201ENST00000567613 1472 ntBASIC16.3■□□□□ 0.2
HIPK3Q9H422 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIPK3Q9H422 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms