Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 AL031133.1-201ENST00000406807 723 ntBASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 ELK2BP-201ENST00000415014 1224 ntBASIC12.24□□□□□ -0.45
NKX6-2Q9C056 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 AC243562.2-201ENST00000561247 970 ntBASIC12.24□□□□□ -0.45
NKX6-2Q9C056 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.24□□□□□ -0.45
NKX6-2Q9C056 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.24□□□□□ -0.45
NKX6-2Q9C056 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 PCDHB17P-202ENST00000623466 3066 ntBASIC12.24□□□□□ -0.45
NKX6-2Q9C056 AP000437.1-201ENST00000624057 2085 ntBASIC12.24□□□□□ -0.45
NKX6-2Q9C056 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 INE2-201ENST00000630399 1874 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 FAM86EP-206ENST00000510506 987 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AL031432.2-201ENST00000566714 459 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AL928711.1-201ENST00000570165 459 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AC008667.4-201ENST00000607370 168 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AC069148.1-201ENST00000608741 768 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AL355877.3-201ENST00000622820 899 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AC022497.1-201ENST00000624916 3691 ntBASIC12.23□□□□□ -0.45
NKX6-2Q9C056 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX6-2Q9C056 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms