Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 Z97205.2-201ENST00000564697 1639 ntBASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 AC007787.1-201ENST00000588095 1583 ntBASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 AL121894.2-201ENST00000602977 491 ntBASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 MIR6080-201ENST00000617359 66 ntBASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 AC018442.1-201ENST00000421439 2061 ntBASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 CETN4P-206ENST00000642099 2168 ntBASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CMSS1Q9BQ75 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 AC015922.1-201ENST00000421102 1152 ntBASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 GPS2P2-201ENST00000430745 888 ntBASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 KRT18P64-201ENST00000434946 1219 ntBASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 AC093520.2-201ENST00000561830 333 ntBASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 MIR4453-201ENST00000584019 89 ntBASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 LINC00628-201ENST00000628516 1289 ntBASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CMSS1Q9BQ75 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms