Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SMOQ99835 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 AC010141.1-201ENST00000411585 623 ntBASIC15.68■□□□□ 0.1
SMOQ99835 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.68■□□□□ 0.1
SMOQ99835 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.68■□□□□ 0.1
SMOQ99835 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.68■□□□□ 0.1
SMOQ99835 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.68■□□□□ 0.1
SMOQ99835 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.68■□□□□ 0.1
SMOQ99835 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.68■□□□□ 0.1
SMOQ99835 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.68■□□□□ 0.1
SMOQ99835 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.68■□□□□ 0.1
SMOQ99835 AC018735.1-201ENST00000437208 1502 ntBASIC15.68■□□□□ 0.1
SMOQ99835 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.67■□□□□ 0.1
SMOQ99835 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
SMOQ99835 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SMOQ99835 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.67■□□□□ 0.1
SMOQ99835 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.67■□□□□ 0.1
SMOQ99835 AL354877.1-201ENST00000424412 413 ntBASIC15.67■□□□□ 0.1
SMOQ99835 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.67■□□□□ 0.1
SMOQ99835 PFN1P12-201ENST00000455938 534 ntBASIC15.67■□□□□ 0.1
SMOQ99835 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.67■□□□□ 0.1
SMOQ99835 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.67■□□□□ 0.1
SMOQ99835 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.67■□□□□ 0.1
SMOQ99835 AC104982.3-201ENST00000581995 514 ntBASIC15.67■□□□□ 0.1
SMOQ99835 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.67■□□□□ 0.1
SMOQ99835 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 CICP14-201ENST00000629111 2732 ntBASIC15.67■□□□□ 0.1
SMOQ99835 SHC1P1-201ENST00000425230 1745 ntBASIC15.67■□□□□ 0.1
SMOQ99835 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SMOQ99835 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SMOQ99835 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SMOQ99835 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.67■□□□□ 0.1
SMOQ99835 E2F3P2-201ENST00000447755 1422 ntBASIC15.67■□□□□ 0.1
SMOQ99835 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
SMOQ99835 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SMOQ99835 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMOQ99835 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.66■□□□□ 0.1
SMOQ99835 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SMOQ99835 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SMOQ99835 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
SMOQ99835 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SMOQ99835 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.66■□□□□ 0.1
SMOQ99835 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SMOQ99835 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SMOQ99835 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.66■□□□□ 0.1
SMOQ99835 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.66■□□□□ 0.1
SMOQ99835 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.66■□□□□ 0.1
SMOQ99835 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.66■□□□□ 0.1
SMOQ99835 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 AC005730.2-201ENST00000564549 1184 ntBASIC15.66■□□□□ 0.1
SMOQ99835 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms