Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.36□□□□□ -0.11
CGREF1Q99674 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.36□□□□□ -0.11
CGREF1Q99674 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.36□□□□□ -0.11
CGREF1Q99674 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.36□□□□□ -0.11
CGREF1Q99674 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.36□□□□□ -0.11
CGREF1Q99674 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CGREF1Q99674 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.36□□□□□ -0.11
CGREF1Q99674 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.36□□□□□ -0.11
CGREF1Q99674 SPDYE12P-201ENST00000618416 771 ntBASIC14.36□□□□□ -0.11
CGREF1Q99674 AC004461.2-201ENST00000629517 803 ntBASIC14.36□□□□□ -0.11
CGREF1Q99674 MBLAC2-202ENST00000514906 1936 ntBASIC14.36□□□□□ -0.11
CGREF1Q99674 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CGREF1Q99674 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CGREF1Q99674 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.36□□□□□ -0.11
CGREF1Q99674 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
CGREF1Q99674 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.36□□□□□ -0.11
CGREF1Q99674 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CGREF1Q99674 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CGREF1Q99674 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 AL022342.1-201ENST00000400363 863 ntBASIC14.35□□□□□ -0.11
CGREF1Q99674 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.35□□□□□ -0.11
CGREF1Q99674 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.35□□□□□ -0.11
CGREF1Q99674 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.35□□□□□ -0.11
CGREF1Q99674 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.35□□□□□ -0.11
CGREF1Q99674 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.35□□□□□ -0.11
CGREF1Q99674 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CGREF1Q99674 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.35□□□□□ -0.11
CGREF1Q99674 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 AGGF1P1-201ENST00000509500 2073 ntBASIC14.35□□□□□ -0.11
CGREF1Q99674 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.35□□□□□ -0.11
CGREF1Q99674 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CGREF1Q99674 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CGREF1Q99674 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.34□□□□□ -0.11
CGREF1Q99674 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CGREF1Q99674 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.34□□□□□ -0.11
CGREF1Q99674 AL137783.1-201ENST00000623494 1896 ntBASIC14.34□□□□□ -0.11
CGREF1Q99674 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CGREF1Q99674 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CGREF1Q99674 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.34□□□□□ -0.11
CGREF1Q99674 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.34□□□□□ -0.11
CGREF1Q99674 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.34□□□□□ -0.11
CGREF1Q99674 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CGREF1Q99674 GAPDHP40-201ENST00000505218 1006 ntBASIC14.34□□□□□ -0.11
CGREF1Q99674 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms