Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 KRT8P1-201ENST00000557533 1207 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 MESTP2-201ENST00000559787 889 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 MIR4309-201ENST00000582498 83 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC005336.1-201ENST00000585431 1243 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 RAB30-201ENST00000260056 1393 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC016396.2-201ENST00000562575 1417 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 HDGF-202ENST00000368206 960 ntTSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 KRT18P33-201ENST00000398525 1043 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AL136084.1-201ENST00000449172 318 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 PRR13-208ENST00000549740 786 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC112702.1-201ENST00000623712 366 ntBASIC4.37□□□□□ -1.71
HMCN1Q96RW7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 RBP4-203ENST00000371469 814 ntTSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ESR1-214ENST00000638569 132 ntTSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HMCN1Q96RW7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 PDPN-208ENST00000509009 571 ntTSL 4 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 EHF-209ENST00000531728 485 ntTSL 2 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC4.36□□□□□ -1.71
HMCN1Q96RW7 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms