Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 CHMP1AP1-201ENST00000445563 662 ntBASIC20.05■□□□□ 0.8
CFAP53Q96M91 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 Z93015.1-201ENST00000451718 390 ntBASIC20.05■□□□□ 0.8
CFAP53Q96M91 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 RPL13AP20-201ENST00000459725 609 ntBASIC20.05■□□□□ 0.8
CFAP53Q96M91 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP53Q96M91 LINC01101-201ENST00000622953 1884 ntBASIC20.05■□□□□ 0.8
CFAP53Q96M91 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
CFAP53Q96M91 AL023775.1-201ENST00000454907 1746 ntBASIC20.05■□□□□ 0.8
CFAP53Q96M91 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 AC079178.1-201ENST00000420915 656 ntBASIC20.04■□□□□ 0.8
CFAP53Q96M91 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 MIR4683-201ENST00000579659 81 ntBASIC20.04■□□□□ 0.8
CFAP53Q96M91 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 AC009093.2-202ENST00000620513 2079 ntBASIC20.04■□□□□ 0.8
CFAP53Q96M91 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CFAP53Q96M91 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP53Q96M91 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CFAP53Q96M91 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.03■□□□□ 0.8
CFAP53Q96M91 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 AC015818.8-201ENST00000587907 1519 ntBASIC20.02■□□□□ 0.8
CFAP53Q96M91 REXO1L6P-201ENST00000603433 1515 ntBASIC20.02■□□□□ 0.8
CFAP53Q96M91 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms