Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 COX5BP8-201ENST00000416911 349 ntBASIC14.51□□□□□ -0.09
VMP1Q96GC9 NME2P1-201ENST00000426182 414 ntBASIC14.51□□□□□ -0.09
VMP1Q96GC9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 RN7SL752P-201ENST00000463779 287 ntBASIC14.51□□□□□ -0.09
VMP1Q96GC9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 AL049840.4-201ENST00000602422 811 ntBASIC14.51□□□□□ -0.09
VMP1Q96GC9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 AC092127.1-201ENST00000567093 3455 ntBASIC14.51□□□□□ -0.09
VMP1Q96GC9 C18orf15-201ENST00000623680 2534 ntBASIC14.51□□□□□ -0.09
VMP1Q96GC9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.51□□□□□ -0.09
VMP1Q96GC9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VMP1Q96GC9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AC063926.2-201ENST00000623766 1308 ntBASIC14.5□□□□□ -0.09
VMP1Q96GC9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 GAPDHP21-201ENST00000450301 1010 ntBASIC14.5□□□□□ -0.09
VMP1Q96GC9 KRT17P7-201ENST00000451704 1104 ntBASIC14.5□□□□□ -0.09
VMP1Q96GC9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AL035252.4-201ENST00000624174 288 ntBASIC14.5□□□□□ -0.09
VMP1Q96GC9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.5□□□□□ -0.09
VMP1Q96GC9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VMP1Q96GC9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms