Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 RPS9P1-201ENST00000419943 583 ntBASIC18.35■□□□□ 0.53
RPGRQ92834 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.35■□□□□ 0.53
RPGRQ92834 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.35■□□□□ 0.53
RPGRQ92834 GCOM2-201ENST00000509133 1104 ntBASIC18.35■□□□□ 0.53
RPGRQ92834 PGAM1P5-201ENST00000548011 764 ntBASIC18.35■□□□□ 0.53
RPGRQ92834 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.35■□□□□ 0.53
RPGRQ92834 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.35■□□□□ 0.53
RPGRQ92834 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RPGRQ92834 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RPGRQ92834 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPGRQ92834 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.35■□□□□ 0.53
RPGRQ92834 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RPGRQ92834 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.35■□□□□ 0.53
RPGRQ92834 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.35■□□□□ 0.53
RPGRQ92834 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.34■□□□□ 0.53
RPGRQ92834 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPGRQ92834 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RPGRQ92834 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPGRQ92834 RN7SL818P-201ENST00000485099 259 ntBASIC18.34■□□□□ 0.53
RPGRQ92834 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.34■□□□□ 0.53
RPGRQ92834 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.34■□□□□ 0.53
RPGRQ92834 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.34■□□□□ 0.53
RPGRQ92834 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.34■□□□□ 0.53
RPGRQ92834 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.34■□□□□ 0.53
RPGRQ92834 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.34■□□□□ 0.53
RPGRQ92834 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.34■□□□□ 0.53
RPGRQ92834 RN7SL725P-201ENST00000606439 259 ntBASIC18.34■□□□□ 0.53
RPGRQ92834 MEG3_2.1-201ENST00000611456 105 ntBASIC18.34■□□□□ 0.53
RPGRQ92834 LINC01783-202ENST00000614408 828 ntBASIC18.34■□□□□ 0.53
RPGRQ92834 BX284668.2-205ENST00000619677 828 ntBASIC18.34■□□□□ 0.53
RPGRQ92834 AC133540.1-201ENST00000620845 1019 ntBASIC18.34■□□□□ 0.53
RPGRQ92834 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RPGRQ92834 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.34■□□□□ 0.53
RPGRQ92834 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.34■□□□□ 0.53
RPGRQ92834 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPGRQ92834 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPGRQ92834 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.34■□□□□ 0.53
RPGRQ92834 CYP4F23P-201ENST00000593402 1579 ntBASIC18.34■□□□□ 0.53
RPGRQ92834 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPGRQ92834 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RPGRQ92834 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPGRQ92834 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.33■□□□□ 0.53
RPGRQ92834 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPGRQ92834 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RPGRQ92834 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPGRQ92834 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPGRQ92834 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RPGRQ92834 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RPGRQ92834 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.33■□□□□ 0.52
RPGRQ92834 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.33■□□□□ 0.52
RPGRQ92834 AL592076.1-201ENST00000424448 303 ntBASIC18.33■□□□□ 0.52
RPGRQ92834 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.33■□□□□ 0.52
RPGRQ92834 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RPGRQ92834 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.33■□□□□ 0.52
RPGRQ92834 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.33■□□□□ 0.52
RPGRQ92834 RBM8B-201ENST00000555532 525 ntBASIC18.33■□□□□ 0.52
RPGRQ92834 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.33■□□□□ 0.52
RPGRQ92834 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 MIR3677-201ENST00000578964 60 ntBASIC18.33■□□□□ 0.52
RPGRQ92834 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.33■□□□□ 0.52
RPGRQ92834 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RPGRQ92834 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPGRQ92834 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.33■□□□□ 0.52
RPGRQ92834 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPGRQ92834 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPGRQ92834 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.33■□□□□ 0.52
RPGRQ92834 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 AC087481.3-201ENST00000602886 1894 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms