Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRFBP1Q8NEF9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRFBP1Q8NEF9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.41□□□□□ -0.1
SRFBP1Q8NEF9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRFBP1Q8NEF9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SRFBP1Q8NEF9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SRFBP1Q8NEF9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.41□□□□□ -0.1
SRFBP1Q8NEF9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 AC055811.4-201ENST00000624039 1754 ntBASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 MIR5189-201ENST00000577370 114 ntBASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRFBP1Q8NEF9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.4□□□□□ -0.11
SRFBP1Q8NEF9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 SNX18-202ENST00000343017 3140 ntBASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 RN7SL837P-201ENST00000463010 287 ntBASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.39□□□□□ -0.11
SRFBP1Q8NEF9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms