Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 AL353779.1-201ENST00000434793 351 ntBASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 GNAQP1-201ENST00000444815 1067 ntBASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 SPTLC1P1-201ENST00000447199 261 ntBASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 AC093004.1-201ENST00000508850 424 ntBASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 BRI3BPP1-201ENST00000594224 787 ntBASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 AL360270.3-201ENST00000609118 1348 ntBASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF439Q8NDP4 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 VDAC1P7-201ENST00000462417 847 ntBASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 INGX-202ENST00000489074 768 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms