Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 TREHP1-201ENST00000531328 465 ntBASIC18.46■□□□□ 0.55
COL23A1Q86Y22 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 CTBP2P8-201ENST00000422584 1330 ntBASIC18.46■□□□□ 0.55
COL23A1Q86Y22 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL23A1Q86Y22 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
COL23A1Q86Y22 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.46■□□□□ 0.54
COL23A1Q86Y22 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
COL23A1Q86Y22 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AC006372.4-201ENST00000624122 1543 ntBASIC18.45■□□□□ 0.54
COL23A1Q86Y22 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 RN7SL277P-201ENST00000481521 288 ntBASIC18.45■□□□□ 0.54
COL23A1Q86Y22 OR5BD1P-201ENST00000532527 817 ntBASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 ABHD17AP9-201ENST00000561925 548 ntBASIC18.45■□□□□ 0.54
COL23A1Q86Y22 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AC010632.2-201ENST00000588369 1224 ntBASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 AC004554.1-201ENST00000422830 1468 ntBASIC18.45■□□□□ 0.54
COL23A1Q86Y22 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL23A1Q86Y22 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.44■□□□□ 0.54
COL23A1Q86Y22 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 MIR645-201ENST00000385283 94 ntBASIC18.44■□□□□ 0.54
COL23A1Q86Y22 HNRNPA1P58-201ENST00000403629 610 ntBASIC18.44■□□□□ 0.54
COL23A1Q86Y22 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 AC106047.2-201ENST00000511723 743 ntBASIC18.44■□□□□ 0.54
COL23A1Q86Y22 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.44■□□□□ 0.54
COL23A1Q86Y22 AL118522.1-201ENST00000611368 560 ntBASIC18.44■□□□□ 0.54
COL23A1Q86Y22 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms