Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 AC015656.1-201ENST00000624209 3578 ntBASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 AC023090.2-201ENST00000625182 2110 ntBASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 AC007686.3-201ENST00000619017 3487 ntBASIC13.27□□□□□ -0.28
HIST2H3AQ71DI3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 AC002472.2-201ENST00000442739 958 ntBASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 ELK1P1-201ENST00000485699 580 ntBASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 AC133539.2-201ENST00000604757 467 ntBASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 LINC00552-201ENST00000625151 2579 ntBASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H3AQ71DI3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 RNU1-114P-201ENST00000365297 166 ntBASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 ACKR1-201ENST00000368121 1240 ntBASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AC022616.1-201ENST00000518688 554 ntBASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AP001582.1-201ENST00000525856 295 ntBASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AC018529.2-202ENST00000611482 3087 ntBASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AC005252.2-201ENST00000624630 1141 ntBASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST2H3AQ71DI3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms