Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 C8orf49-201ENST00000525043 1968 ntBASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NHLRC1Q6VVB1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 PTENP1-202ENST00000532280 3996 ntBASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 CRB3P1-201ENST00000449338 276 ntBASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 WASH4P-201ENST00000564273 1246 ntBASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 AC140912.1-201ENST00000577171 1054 ntBASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 AC133539.2-201ENST00000604757 467 ntBASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NHLRC1Q6VVB1 AC006504.5-208ENST00000588784 2401 ntBASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 AC114812.1-204ENST00000449669 728 ntBASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 TERF1P3-201ENST00000505638 1227 ntBASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms