Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC139749.1-202ENST00000617529 3139 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC098850.1-201ENST00000419919 790 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 FAM21FP-201ENST00000426241 1131 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 DUXAP7-201ENST00000431038 689 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 PFN1P12-201ENST00000455938 534 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC104596.2-201ENST00000512793 793 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 RN7SL48P-201ENST00000579283 293 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 RN7SL190P-201ENST00000582519 257 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC010319.3-201ENST00000597028 470 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AL033527.5-202ENST00000641632 1098 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC018665.1-201ENST00000622927 1362 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AL365209.1-201ENST00000624418 6473 ntBASIC12.51□□□□□ -0.41
TREML4Q6UXN2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TREML4Q6UXN2 ZBED1P1-201ENST00000502364 1930 ntBASIC12.5□□□□□ -0.41
TREML4Q6UXN2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 GOLGA2P4-201ENST00000441462 777 ntBASIC12.5□□□□□ -0.41
TREML4Q6UXN2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TREML4Q6UXN2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms