Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 AL137784.3-201ENST00000623858 2288 ntBASIC15.83■□□□□ 0.12
RNF43Q68DV7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 AL645937.2-201ENST00000396808 931 ntBASIC15.82■□□□□ 0.12
RNF43Q68DV7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 BCRP2-202ENST00000447763 634 ntBASIC15.82■□□□□ 0.12
RNF43Q68DV7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 AC106760.1-201ENST00000508690 800 ntBASIC15.82■□□□□ 0.12
RNF43Q68DV7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 BCRP6-201ENST00000510112 632 ntBASIC15.82■□□□□ 0.12
RNF43Q68DV7 BCRP7-201ENST00000511549 544 ntBASIC15.82■□□□□ 0.12
RNF43Q68DV7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 AC134312.5-201ENST00000568031 1313 ntBASIC15.82■□□□□ 0.12
RNF43Q68DV7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF43Q68DV7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF43Q68DV7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 MIR1247-201ENST00000408206 136 ntBASIC15.81■□□□□ 0.12
RNF43Q68DV7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 RPL7P3-201ENST00000441388 714 ntBASIC15.81■□□□□ 0.12
RNF43Q68DV7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 RN7SL190P-201ENST00000582519 257 ntBASIC15.81■□□□□ 0.12
RNF43Q68DV7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms