Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHRNB3Q05901 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHRNB3Q05901 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 AL627223.1-201ENST00000416693 442 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 KRT18P32-201ENST00000424695 1287 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 AL353705.2-201ENST00000428243 662 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 FAM86GP-201ENST00000448322 971 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC067863.1-201ENST00000494933 530 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC079140.1-201ENST00000508039 487 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 LINC01225-203ENST00000563550 1244 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 RARRES2P9-201ENST00000565168 469 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC093028.1-201ENST00000622998 982 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 LINC00628-201ENST00000628516 1289 ntBASIC14.33□□□□□ -0.12
CHRNB3Q05901 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRNB3Q05901 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRNB3Q05901 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 UXT-AS1-201ENST00000590504 1525 ntBASIC14.32□□□□□ -0.12
CHRNB3Q05901 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 AL133267.1-201ENST00000398220 340 ntBASIC14.32□□□□□ -0.12
CHRNB3Q05901 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 HIST3H2BA-201ENST00000436555 524 ntBASIC14.32□□□□□ -0.12
CHRNB3Q05901 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 KRT8P48-201ENST00000515599 1220 ntBASIC14.32□□□□□ -0.12
CHRNB3Q05901 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHRNB3Q05901 AC009093.7-201ENST00000623853 1223 ntBASIC14.32□□□□□ -0.12
CHRNB3Q05901 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRNB3Q05901 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms