Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.72□□□□□ -0.21
CACNA1BQ00975 AC022616.1-201ENST00000518688 554 ntBASIC13.72□□□□□ -0.21
CACNA1BQ00975 AC138701.2-201ENST00000553634 226 ntBASIC13.72□□□□□ -0.21
CACNA1BQ00975 MIR7848-201ENST00000617402 101 ntBASIC13.72□□□□□ -0.21
CACNA1BQ00975 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC13.72□□□□□ -0.21
CACNA1BQ00975 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 AL627095.1-201ENST00000414775 321 ntBASIC13.71□□□□□ -0.21
CACNA1BQ00975 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 AC079325.1-201ENST00000430386 857 ntBASIC13.71□□□□□ -0.21
CACNA1BQ00975 AC007952.4-201ENST00000573866 637 ntBASIC13.71□□□□□ -0.21
CACNA1BQ00975 RN7SL357P-201ENST00000581065 298 ntBASIC13.71□□□□□ -0.21
CACNA1BQ00975 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CACNA1BQ00975 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CACNA1BQ00975 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1BQ00975 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1BQ00975 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CACNA1BQ00975 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1BQ00975 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1BQ00975 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1BQ00975 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.71□□□□□ -0.22
CACNA1BQ00975 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
CACNA1BQ00975 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CACNA1BQ00975 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1BQ00975 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 AC093106.1-201ENST00000437271 352 ntBASIC13.7□□□□□ -0.22
CACNA1BQ00975 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 AC013553.1-201ENST00000560906 267 ntBASIC13.7□□□□□ -0.22
CACNA1BQ00975 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 LTB4R2-202ENST00000528054 3092 ntBASIC13.7□□□□□ -0.22
CACNA1BQ00975 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 GNG10P1-201ENST00000452289 199 ntBASIC13.7□□□□□ -0.22
CACNA1BQ00975 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 MIR3188-201ENST00000583494 85 ntBASIC13.7□□□□□ -0.22
CACNA1BQ00975 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.7□□□□□ -0.22
CACNA1BQ00975 AC144522.1-201ENST00000625111 1658 ntBASIC13.7□□□□□ -0.22
CACNA1BQ00975 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1BQ00975 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CACNA1BQ00975 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms