Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX6-1P78426 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX6-1P78426 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC025181.2-201ENST00000606994 802 ntBASIC13.36□□□□□ -0.27
NKX6-1P78426 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC105250.1-201ENST00000509378 2057 ntBASIC13.36□□□□□ -0.27
NKX6-1P78426 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NKX6-1P78426 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC022532.1-201ENST00000624563 1728 ntBASIC13.36□□□□□ -0.27
NKX6-1P78426 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.36□□□□□ -0.27
NKX6-1P78426 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.35□□□□□ -0.27
NKX6-1P78426 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 SLC25A24P2-201ENST00000415059 510 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 AC006033.1-201ENST00000440505 426 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX6-1P78426 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX6-1P78426 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.35□□□□□ -0.27
NKX6-1P78426 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.35□□□□□ -0.27
NKX6-1P78426 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 AP001258.2-201ENST00000529891 490 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 RHOQP1-201ENST00000555758 579 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX6-1P78426 RN7SL190P-201ENST00000582519 257 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX6-1P78426 AC093813.1-201ENST00000605066 256 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 AC107373.2-201ENST00000607735 490 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 AL022328.3-201ENST00000607943 679 ntBASIC13.35□□□□□ -0.27
NKX6-1P78426 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.35□□□□□ -0.27
NKX6-1P78426 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-1P78426 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-1P78426 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms