Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 AC007191.1-201ENST00000623179 2995 ntBASIC16.82■□□□□ 0.28
ASIC1P78348 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ASIC1P78348 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ASIC1P78348 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 DGCR5-201ENST00000399539 862 ntBASIC16.82■□□□□ 0.28
ASIC1P78348 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 EIF3FP3-201ENST00000434851 1086 ntBASIC16.82■□□□□ 0.28
ASIC1P78348 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.82■□□□□ 0.28
ASIC1P78348 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 AC026434.2-201ENST00000506094 1078 ntBASIC16.82■□□□□ 0.28
ASIC1P78348 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.82■□□□□ 0.28
ASIC1P78348 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 AP001063.1-201ENST00000568332 529 ntBASIC16.82■□□□□ 0.28
ASIC1P78348 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ASIC1P78348 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.82■□□□□ 0.28
ASIC1P78348 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.82■□□□□ 0.28
ASIC1P78348 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.82■□□□□ 0.28
ASIC1P78348 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ASIC1P78348 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ASIC1P78348 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.81■□□□□ 0.28
ASIC1P78348 AC026748.1-201ENST00000624349 3251 ntBASIC16.81■□□□□ 0.28
ASIC1P78348 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.81■□□□□ 0.28
ASIC1P78348 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ASIC1P78348 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.81■□□□□ 0.28
ASIC1P78348 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.81■□□□□ 0.28
ASIC1P78348 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.81■□□□□ 0.28
ASIC1P78348 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 AC113367.3-201ENST00000508316 1912 ntBASIC16.81■□□□□ 0.28
ASIC1P78348 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.81■□□□□ 0.28
ASIC1P78348 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.81■□□□□ 0.28
ASIC1P78348 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ASIC1P78348 AL033527.5-201ENST00000641382 801 ntBASIC16.81■□□□□ 0.28
ASIC1P78348 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ASIC1P78348 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.81■□□□□ 0.28
ASIC1P78348 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.81■□□□□ 0.28
ASIC1P78348 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
ASIC1P78348 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ASIC1P78348 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ASIC1P78348 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ASIC1P78348 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.81■□□□□ 0.28
ASIC1P78348 SNX18-202ENST00000343017 3140 ntBASIC16.81■□□□□ 0.28
ASIC1P78348 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ASIC1P78348 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.8■□□□□ 0.28
ASIC1P78348 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
ASIC1P78348 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.8■□□□□ 0.28
ASIC1P78348 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.8■□□□□ 0.28
ASIC1P78348 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms