Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 TLE1P1-201ENST00000422965 589 ntBASIC13.16□□□□□ -0.3
HIST1H3AP68431 CRB3P1-201ENST00000449338 276 ntBASIC13.16□□□□□ -0.3
HIST1H3AP68431 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 AC138969.2-201ENST00000532739 9932 ntBASIC13.16□□□□□ -0.3
HIST1H3AP68431 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 AC005089.1-201ENST00000619486 2241 ntBASIC13.16□□□□□ -0.3
HIST1H3AP68431 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 ACTG1P3-201ENST00000431775 1114 ntBASIC13.15□□□□□ -0.3
HIST1H3AP68431 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
HIST1H3AP68431 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H3AP68431 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H3AP68431 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
HIST1H3AP68431 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H3AP68431 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H3AP68431 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AC015802.1-201ENST00000588104 1449 ntBASIC13.14□□□□□ -0.31
HIST1H3AP68431 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms