Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
PER3P56645 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 CALR4P-201ENST00000431943 946 ntBASIC14.05□□□□□ -0.16
PER3P56645 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.05□□□□□ -0.16
PER3P56645 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.05□□□□□ -0.16
PER3P56645 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 RHOQP1-201ENST00000555758 579 ntBASIC14.05□□□□□ -0.16
PER3P56645 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 AC244452.3-201ENST00000636814 210 ntBASIC14.05□□□□□ -0.16
PER3P56645 AC008687.7-202ENST00000637404 953 ntBASIC14.05□□□□□ -0.16
PER3P56645 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 AC005912.2-201ENST00000619492 2400 ntBASIC14.05□□□□□ -0.16
PER3P56645 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PER3P56645 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PER3P56645 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PER3P56645 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PER3P56645 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.04□□□□□ -0.16
PER3P56645 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PER3P56645 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.04□□□□□ -0.16
PER3P56645 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.04□□□□□ -0.16
PER3P56645 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.04□□□□□ -0.16
PER3P56645 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 KRT90P-201ENST00000549264 1064 ntBASIC14.04□□□□□ -0.16
PER3P56645 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.04□□□□□ -0.16
PER3P56645 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.04□□□□□ -0.16
PER3P56645 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.04□□□□□ -0.16
PER3P56645 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PER3P56645 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PER3P56645 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PER3P56645 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.03□□□□□ -0.16
PER3P56645 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms