Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH11P55287 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 HIST3H2BA-201ENST00000436555 524 ntBASIC13.87□□□□□ -0.19
CDH11P55287 TARDBPP1-201ENST00000442013 1203 ntBASIC13.87□□□□□ -0.19
CDH11P55287 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH11P55287 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH11P55287 AC140912.1-201ENST00000577171 1054 ntBASIC13.87□□□□□ -0.19
CDH11P55287 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.87□□□□□ -0.19
CDH11P55287 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH11P55287 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 AC018442.1-201ENST00000421439 2061 ntBASIC13.87□□□□□ -0.19
CDH11P55287 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CDH11P55287 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDH11P55287 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDH11P55287 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDH11P55287 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CDH11P55287 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH11P55287 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CDH11P55287 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CDH11P55287 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH11P55287 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 RN7SL692P-201ENST00000464677 288 ntBASIC13.86□□□□□ -0.19
CDH11P55287 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 DOC2GP-202ENST00000514950 1163 ntBASIC13.86□□□□□ -0.19
CDH11P55287 SDHAP3-202ENST00000515467 728 ntBASIC13.86□□□□□ -0.19
CDH11P55287 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH11P55287 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH11P55287 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH11P55287 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH11P55287 AC015910.1-201ENST00000579400 975 ntBASIC13.86□□□□□ -0.19
CDH11P55287 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH11P55287 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CDH11P55287 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH11P55287 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.86□□□□□ -0.19
CDH11P55287 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
CDH11P55287 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH11P55287 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
CDH11P55287 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms