Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
GBX2P52951 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.49□□□□□ -0.25
GBX2P52951 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.49□□□□□ -0.25
GBX2P52951 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.49□□□□□ -0.25
GBX2P52951 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 AL121723.1-201ENST00000445194 1519 ntBASIC13.49□□□□□ -0.25
GBX2P52951 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
GBX2P52951 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GBX2P52951 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GBX2P52951 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 RBPMS2P1-201ENST00000437762 623 ntBASIC13.48□□□□□ -0.25
GBX2P52951 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.48□□□□□ -0.25
GBX2P52951 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.48□□□□□ -0.25
GBX2P52951 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.48□□□□□ -0.25
GBX2P52951 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 AC022145.2-201ENST00000598203 171 ntBASIC13.48□□□□□ -0.25
GBX2P52951 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 AC105339.1-204ENST00000636249 355 ntBASIC13.48□□□□□ -0.25
GBX2P52951 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.48□□□□□ -0.25
GBX2P52951 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GBX2P52951 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.48□□□□□ -0.25
GBX2P52951 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.48□□□□□ -0.25
GBX2P52951 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GBX2P52951 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.47□□□□□ -0.25
GBX2P52951 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.47□□□□□ -0.25
GBX2P52951 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
GBX2P52951 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.47□□□□□ -0.25
GBX2P52951 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
GBX2P52951 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.47□□□□□ -0.25
GBX2P52951 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
GBX2P52951 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GBX2P52951 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.47□□□□□ -0.25
GBX2P52951 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GBX2P52951 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms