Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
USP11P51784 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
USP11P51784 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.93■□□□□ 0.3
USP11P51784 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.93■□□□□ 0.3
USP11P51784 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.93■□□□□ 0.3
USP11P51784 AP006547.1-201ENST00000563435 692 ntBASIC16.93■□□□□ 0.3
USP11P51784 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.93■□□□□ 0.3
USP11P51784 MIR4683-201ENST00000579659 81 ntBASIC16.93■□□□□ 0.3
USP11P51784 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.93■□□□□ 0.3
USP11P51784 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.93■□□□□ 0.3
USP11P51784 AC008825.2-201ENST00000603374 718 ntBASIC16.93■□□□□ 0.3
USP11P51784 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 AC007292.2-201ENST00000593524 1812 ntBASIC16.93■□□□□ 0.3
USP11P51784 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 AL136379.1-201ENST00000623471 2642 ntBASIC16.93■□□□□ 0.3
USP11P51784 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.93■□□□□ 0.3
USP11P51784 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 TUBB1P2-201ENST00000422712 1306 ntBASIC16.93■□□□□ 0.3
USP11P51784 TUBB1P1-201ENST00000503144 1300 ntBASIC16.93■□□□□ 0.3
USP11P51784 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.93■□□□□ 0.3
USP11P51784 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP11P51784 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
USP11P51784 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 CICP14-201ENST00000629111 2732 ntBASIC16.92■□□□□ 0.3
USP11P51784 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.92■□□□□ 0.3
USP11P51784 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.92■□□□□ 0.3
USP11P51784 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.92■□□□□ 0.3
USP11P51784 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
USP11P51784 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.92■□□□□ 0.3
USP11P51784 AL358472.3-201ENST00000608147 415 ntBASIC16.92■□□□□ 0.3
USP11P51784 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.92■□□□□ 0.3
USP11P51784 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
USP11P51784 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 AL023775.1-201ENST00000454907 1746 ntBASIC16.92■□□□□ 0.3
USP11P51784 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USP11P51784 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.92■□□□□ 0.3
USP11P51784 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP11P51784 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
USP11P51784 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms