Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
MDH1P40925 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 HLA-H-201ENST00000383620 1096 ntBASIC15.14■□□□□ 0.01
MDH1P40925 AL133267.1-201ENST00000398220 340 ntBASIC15.14■□□□□ 0.01
MDH1P40925 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.14■□□□□ 0.01
MDH1P40925 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 AC074044.1-201ENST00000609673 707 ntBASIC15.14■□□□□ 0.01
MDH1P40925 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
MDH1P40925 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 AC025580.3-201ENST00000617932 1424 ntBASIC15.14■□□□□ 0.01
MDH1P40925 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 AP002761.4-201ENST00000565433 3361 ntBASIC15.14■□□□□ 0.01
MDH1P40925 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.14■□□□□ 0.01
MDH1P40925 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 AL360270.3-201ENST00000609118 1348 ntBASIC15.14■□□□□ 0.01
MDH1P40925 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.14■□□□□ 0.01
MDH1P40925 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 DMBT1P1-203ENST00000636837 4628 ntBASIC15.13■□□□□ 0.01
MDH1P40925 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 PCDHB18P-202ENST00000526308 3197 ntBASIC15.13■□□□□ 0.01
MDH1P40925 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MDH1P40925 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.13■□□□□ 0.01
MDH1P40925 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 UNC93B6-202ENST00000528242 690 ntBASIC15.13■□□□□ 0.01
MDH1P40925 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.13■□□□□ 0.01
MDH1P40925 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MDH1P40925 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms