Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.8■□□□□ 0.6
COL15A1P39059 AC131206.1-201ENST00000538078 1211 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
COL15A1P39059 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.8■□□□□ 0.6
COL15A1P39059 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.8■□□□□ 0.6
COL15A1P39059 AC007881.3-201ENST00000608897 607 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 BX088702.1-201ENST00000610784 235 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 AC133540.1-201ENST00000620845 1019 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 AC027601.3-201ENST00000622907 509 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COL15A1P39059 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL15A1P39059 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL15A1P39059 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.79■□□□□ 0.6
COL15A1P39059 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.79■□□□□ 0.6
COL15A1P39059 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.79■□□□□ 0.6
COL15A1P39059 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.79■□□□□ 0.6
COL15A1P39059 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.79■□□□□ 0.6
COL15A1P39059 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL15A1P39059 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.79■□□□□ 0.6
COL15A1P39059 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL15A1P39059 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.79■□□□□ 0.6
COL15A1P39059 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 ACE3P-201ENST00000423435 1973 ntBASIC18.78■□□□□ 0.6
COL15A1P39059 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.78■□□□□ 0.6
COL15A1P39059 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
COL15A1P39059 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.78■□□□□ 0.6
COL15A1P39059 AC126177.1-201ENST00000547829 2218 ntBASIC18.78■□□□□ 0.6
COL15A1P39059 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL15A1P39059 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.78■□□□□ 0.6
COL15A1P39059 LINC01165-201ENST00000445190 1623 ntBASIC18.78■□□□□ 0.6
COL15A1P39059 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 PGAM1P5-201ENST00000548011 764 ntBASIC18.78■□□□□ 0.6
COL15A1P39059 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.78■□□□□ 0.6
COL15A1P39059 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL15A1P39059 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.78■□□□□ 0.6
COL15A1P39059 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.78■□□□□ 0.6
COL15A1P39059 AC103810.10-201ENST00000606504 343 ntBASIC18.78■□□□□ 0.6
COL15A1P39059 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.78■□□□□ 0.6
COL15A1P39059 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
COL15A1P39059 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL15A1P39059 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COL15A1P39059 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.77■□□□□ 0.6
COL15A1P39059 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
COL15A1P39059 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
COL15A1P39059 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.77■□□□□ 0.6
COL15A1P39059 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.77■□□□□ 0.6
COL15A1P39059 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.77■□□□□ 0.6
COL15A1P39059 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COL15A1P39059 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL15A1P39059 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL15A1P39059 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms