Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.91■□□□□ 0.14
CHKAP35790 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.91■□□□□ 0.14
CHKAP35790 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.91■□□□□ 0.14
CHKAP35790 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 AL645937.2-201ENST00000396808 931 ntBASIC15.91■□□□□ 0.14
CHKAP35790 C2orf27AP3-201ENST00000434123 579 ntBASIC15.91■□□□□ 0.14
CHKAP35790 AC114812.1-204ENST00000449669 728 ntBASIC15.91■□□□□ 0.14
CHKAP35790 CTBP2P5-201ENST00000454986 1264 ntBASIC15.91■□□□□ 0.14
CHKAP35790 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CHKAP35790 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.91■□□□□ 0.14
CHKAP35790 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.91■□□□□ 0.14
CHKAP35790 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.91■□□□□ 0.14
CHKAP35790 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.91■□□□□ 0.14
CHKAP35790 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.91■□□□□ 0.14
CHKAP35790 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHKAP35790 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.91■□□□□ 0.14
CHKAP35790 AL354718.3-201ENST00000616414 581 ntBASIC15.91■□□□□ 0.14
CHKAP35790 CR382287.1-201ENST00000623954 586 ntBASIC15.91■□□□□ 0.14
CHKAP35790 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 AC104581.4-201ENST00000623126 3052 ntBASIC15.91■□□□□ 0.14
CHKAP35790 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHKAP35790 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHKAP35790 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHKAP35790 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHKAP35790 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHKAP35790 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKAP35790 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CHKAP35790 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.9■□□□□ 0.14
CHKAP35790 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.9■□□□□ 0.14
CHKAP35790 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 RPL7P3-201ENST00000441388 714 ntBASIC15.9■□□□□ 0.14
CHKAP35790 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CHKAP35790 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 SNX29P1-201ENST00000548357 1007 ntBASIC15.9■□□□□ 0.14
CHKAP35790 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 AC041040.2-201ENST00000622926 2899 ntBASIC15.9■□□□□ 0.14
CHKAP35790 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.9■□□□□ 0.14
CHKAP35790 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKAP35790 BX640514.1-201ENST00000583223 1918 ntBASIC15.9■□□□□ 0.14
CHKAP35790 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHKAP35790 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms