Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT9P35527 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KRT9P35527 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 AC092135.3-201ENST00000624151 1846 ntBASIC16.52■□□□□ 0.24
KRT9P35527 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KRT9P35527 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
KRT9P35527 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT9P35527 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT9P35527 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT9P35527 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT9P35527 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT9P35527 SPDYE18-201ENST00000510091 1050 ntBASIC16.52■□□□□ 0.24
KRT9P35527 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT9P35527 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT9P35527 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT9P35527 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT9P35527 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KRT9P35527 AC010327.5-201ENST00000586923 3061 ntBASIC16.52■□□□□ 0.23
KRT9P35527 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
KRT9P35527 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.52■□□□□ 0.23
KRT9P35527 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.52■□□□□ 0.23
KRT9P35527 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT9P35527 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KRT9P35527 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT9P35527 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 MRPS18AP1-201ENST00000414458 589 ntBASIC16.51■□□□□ 0.23
KRT9P35527 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT9P35527 AL589987.1-201ENST00000453380 819 ntBASIC16.51■□□□□ 0.23
KRT9P35527 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 INGX-202ENST00000489074 768 ntBASIC16.51■□□□□ 0.23
KRT9P35527 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT9P35527 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 AC027796.2-201ENST00000575326 344 ntBASIC16.51■□□□□ 0.23
KRT9P35527 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 AC067750.1-201ENST00000608826 6545 ntBASIC16.51■□□□□ 0.23
KRT9P35527 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 AC055811.4-201ENST00000624039 1754 ntBASIC16.51■□□□□ 0.23
KRT9P35527 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KRT9P35527 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT9P35527 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT9P35527 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT9P35527 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT9P35527 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms