Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 AL138799.1-201ENST00000448213 1675 ntBASIC13.29□□□□□ -0.28
THBS4P35443 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 AC112492.5-201ENST00000421897 457 ntBASIC13.29□□□□□ -0.28
THBS4P35443 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.29□□□□□ -0.28
THBS4P35443 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS4P35443 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS4P35443 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 SLC25A47P1-201ENST00000531577 414 ntBASIC13.29□□□□□ -0.28
THBS4P35443 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.29□□□□□ -0.28
THBS4P35443 HILS1-202ENST00000545329 423 ntBASIC13.29□□□□□ -0.28
THBS4P35443 PTP4A1P2-201ENST00000546033 454 ntBASIC13.29□□□□□ -0.28
THBS4P35443 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 RAB43P1-201ENST00000561790 589 ntBASIC13.29□□□□□ -0.28
THBS4P35443 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 AP001063.1-201ENST00000568332 529 ntBASIC13.29□□□□□ -0.28
THBS4P35443 AC009486.1-201ENST00000569860 813 ntBASIC13.29□□□□□ -0.28
THBS4P35443 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS4P35443 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS4P35443 BTNL10-201ENST00000595971 695 ntBASIC13.29□□□□□ -0.28
THBS4P35443 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.29□□□□□ -0.28
THBS4P35443 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
THBS4P35443 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
THBS4P35443 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 AC093433.1-201ENST00000458048 571 ntBASIC13.28□□□□□ -0.28
THBS4P35443 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
THBS4P35443 AC106886.1-201ENST00000568660 600 ntBASIC13.28□□□□□ -0.28
THBS4P35443 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
THBS4P35443 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS4P35443 AC007787.1-201ENST00000588095 1583 ntBASIC13.28□□□□□ -0.28
THBS4P35443 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS4P35443 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS4P35443 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.27□□□□□ -0.28
THBS4P35443 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms