Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.26■□□□□ 0.03
CCND1P24385 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.25■□□□□ 0.03
CCND1P24385 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCND1P24385 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CCND1P24385 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 AC127383.1-201ENST00000444697 1800 ntBASIC15.25■□□□□ 0.03
CCND1P24385 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCND1P24385 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.25■□□□□ 0.03
CCND1P24385 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.25■□□□□ 0.03
CCND1P24385 BASP1P1-201ENST00000430708 665 ntBASIC15.25■□□□□ 0.03
CCND1P24385 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.25■□□□□ 0.03
CCND1P24385 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.25■□□□□ 0.03
CCND1P24385 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.25■□□□□ 0.03
CCND1P24385 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.25■□□□□ 0.03
CCND1P24385 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 AL844908.2-201ENST00000609461 460 ntBASIC15.25■□□□□ 0.03
CCND1P24385 AL390754.1-201ENST00000619088 582 ntBASIC15.25■□□□□ 0.03
CCND1P24385 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.25■□□□□ 0.03
CCND1P24385 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.25■□□□□ 0.03
CCND1P24385 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.25■□□□□ 0.03
CCND1P24385 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.25■□□□□ 0.03
CCND1P24385 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.25■□□□□ 0.03
CCND1P24385 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCND1P24385 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.25■□□□□ 0.03
CCND1P24385 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCND1P24385 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCND1P24385 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.24■□□□□ 0.03
CCND1P24385 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.24■□□□□ 0.03
CCND1P24385 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
CCND1P24385 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.24■□□□□ 0.03
CCND1P24385 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 AL512638.1-201ENST00000457493 794 ntBASIC15.24■□□□□ 0.03
CCND1P24385 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.24■□□□□ 0.03
CCND1P24385 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.24■□□□□ 0.03
CCND1P24385 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.24■□□□□ 0.03
CCND1P24385 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.24■□□□□ 0.03
CCND1P24385 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.24■□□□□ 0.03
CCND1P24385 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCND1P24385 Z82170.1-201ENST00000625081 3192 ntBASIC15.24■□□□□ 0.03
CCND1P24385 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCND1P24385 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.24■□□□□ 0.03
CCND1P24385 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCND1P24385 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCND1P24385 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCND1P24385 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.23■□□□□ 0.03
CCND1P24385 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCND1P24385 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCND1P24385 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.23■□□□□ 0.03
CCND1P24385 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCND1P24385 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.23■□□□□ 0.03
CCND1P24385 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.23■□□□□ 0.03
CCND1P24385 AC015922.1-201ENST00000421102 1152 ntBASIC15.23■□□□□ 0.03
CCND1P24385 TSSK5P-201ENST00000423978 907 ntBASIC15.23■□□□□ 0.03
CCND1P24385 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms