Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 AC105206.1-202ENST00000314927 2368 ntBASIC14.28□□□□□ -0.12
NCK1P16333 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.28□□□□□ -0.12
NCK1P16333 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 AC026150.2-201ENST00000564693 1156 ntBASIC14.28□□□□□ -0.12
NCK1P16333 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 AL589739.1-201ENST00000607720 493 ntBASIC14.28□□□□□ -0.12
NCK1P16333 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 AC087386.2-201ENST00000623212 4637 ntBASIC14.28□□□□□ -0.12
NCK1P16333 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NCK1P16333 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NCK1P16333 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
NCK1P16333 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NCK1P16333 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
NCK1P16333 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.27□□□□□ -0.12
NCK1P16333 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.27□□□□□ -0.12
NCK1P16333 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NCK1P16333 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.27□□□□□ -0.12
NCK1P16333 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
NCK1P16333 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NCK1P16333 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.27□□□□□ -0.13
NCK1P16333 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 AL627223.1-201ENST00000416693 442 ntBASIC14.27□□□□□ -0.13
NCK1P16333 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.27□□□□□ -0.13
NCK1P16333 AL080243.2-201ENST00000418783 582 ntBASIC14.27□□□□□ -0.13
NCK1P16333 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.27□□□□□ -0.13
NCK1P16333 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.27□□□□□ -0.13
NCK1P16333 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.27□□□□□ -0.13
NCK1P16333 MKNK2P1-201ENST00000437526 628 ntBASIC14.27□□□□□ -0.13
NCK1P16333 CEND1P1-201ENST00000451006 455 ntBASIC14.27□□□□□ -0.13
NCK1P16333 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.27□□□□□ -0.13
NCK1P16333 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.27□□□□□ -0.13
NCK1P16333 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.27□□□□□ -0.13
NCK1P16333 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.27□□□□□ -0.13
NCK1P16333 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.27□□□□□ -0.13
NCK1P16333 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.27□□□□□ -0.13
NCK1P16333 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.27□□□□□ -0.13
NCK1P16333 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.27□□□□□ -0.13
NCK1P16333 AL033527.5-202ENST00000641632 1098 ntBASIC14.27□□□□□ -0.13
NCK1P16333 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.27□□□□□ -0.13
NCK1P16333 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.27□□□□□ -0.13
NCK1P16333 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.27□□□□□ -0.13
NCK1P16333 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.27□□□□□ -0.13
NCK1P16333 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 COL6A4P2-202ENST00000504443 2753 ntBASIC14.27□□□□□ -0.13
NCK1P16333 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.27□□□□□ -0.13
NCK1P16333 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NCK1P16333 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NCK1P16333 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NCK1P16333 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.26□□□□□ -0.13
NCK1P16333 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms