Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AL353705.2-201ENST00000428243 662 ntBASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AC007967.4-201ENST00000614700 386 ntBASIC14.66□□□□□ -0.06
LINGO3P0C6S8 MIR6080-201ENST00000617359 66 ntBASIC14.66□□□□□ -0.06
LINGO3P0C6S8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 AL136982.4-201ENST00000437689 1740 ntBASIC14.66□□□□□ -0.06
LINGO3P0C6S8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINGO3P0C6S8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.65□□□□□ -0.06
LINGO3P0C6S8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AP001972.5-201ENST00000624624 2338 ntBASIC14.65□□□□□ -0.06
LINGO3P0C6S8 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 BANF1P1-201ENST00000553684 263 ntBASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AC025678.2-201ENST00000562061 970 ntBASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AC004449.1-201ENST00000564240 433 ntBASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 MIR4453-201ENST00000584019 89 ntBASIC14.65□□□□□ -0.06
LINGO3P0C6S8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AC003101.2-201ENST00000612557 442 ntBASIC14.65□□□□□ -0.06
LINGO3P0C6S8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINGO3P0C6S8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
LINGO3P0C6S8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINGO3P0C6S8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms