Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.19□□□□□ -0.3
SFTPBP07988 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.19□□□□□ -0.3
SFTPBP07988 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SFTPBP07988 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 AP000845.1-201ENST00000581677 2131 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SFTPBP07988 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.18□□□□□ -0.3
SFTPBP07988 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 RPL13P2-201ENST00000440687 659 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.18□□□□□ -0.3
SFTPBP07988 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.18□□□□□ -0.3
SFTPBP07988 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 AC010336.2-201ENST00000564226 506 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SFTPBP07988 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SFTPBP07988 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 LINC01115-203ENST00000606068 577 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 LINC01230-201ENST00000625222 3017 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.18□□□□□ -0.3
SFTPBP07988 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.18□□□□□ -0.3
SFTPBP07988 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SFTPBP07988 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 ACE3P-201ENST00000423435 1973 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.18□□□□□ -0.3
SFTPBP07988 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SFTPBP07988 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SFTPBP07988 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 AC079781.5-202ENST00000641784 3743 ntBASIC13.17□□□□□ -0.3
SFTPBP07988 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms