Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 AC097376.2-205ENST00000610159 5334 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CAPN1P07384 TTTY23B-201ENST00000442790 549 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 ACA64.2-201ENST00000459014 129 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 AC104596.2-201ENST00000512793 793 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 KRT17P8-201ENST00000540749 863 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN1P07384 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN1P07384 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
CAPN1P07384 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 INTS4P1-203ENST00000641008 3683 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 AC005912.2-201ENST00000619492 2400 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 AC140479.7-201ENST00000636301 2332 ntBASIC14.89□□□□□ -0.03
CAPN1P07384 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CAPN1P07384 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN1P07384 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN1P07384 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN1P07384 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN1P07384 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.89□□□□□ -0.03
CAPN1P07384 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.89□□□□□ -0.03
CAPN1P07384 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.89□□□□□ -0.03
CAPN1P07384 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 MIR6752-201ENST00000618442 71 ntBASIC14.89□□□□□ -0.03
CAPN1P07384 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.89□□□□□ -0.03
CAPN1P07384 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.89□□□□□ -0.03
CAPN1P07384 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CAPN1P07384 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN1P07384 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CAPN1P07384 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms