Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.95■□□□□ 0.3
TPM3P06753 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.95■□□□□ 0.3
TPM3P06753 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 AC018529.1-201ENST00000613063 361 ntBASIC16.95■□□□□ 0.3
TPM3P06753 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 COL6A4P2-202ENST00000504443 2753 ntBASIC16.95■□□□□ 0.3
TPM3P06753 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 YBX2P1-201ENST00000394192 760 ntBASIC16.94■□□□□ 0.3
TPM3P06753 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM3P06753 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM3P06753 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 AC022447.6-201ENST00000515522 438 ntBASIC16.94■□□□□ 0.3
TPM3P06753 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM3P06753 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.94■□□□□ 0.3
TPM3P06753 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM3P06753 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM3P06753 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM3P06753 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM3P06753 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM3P06753 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.93■□□□□ 0.3
TPM3P06753 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
TPM3P06753 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TPM3P06753 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 AL035456.1-201ENST00000456064 1369 ntBASIC16.93■□□□□ 0.3
TPM3P06753 KRT8P12-202ENST00000472924 1397 ntBASIC16.93■□□□□ 0.3
TPM3P06753 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.93■□□□□ 0.3
TPM3P06753 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 AC104457.1-201ENST00000401024 814 ntBASIC16.93■□□□□ 0.3
TPM3P06753 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TPM3P06753 TPM4P1-201ENST00000436100 807 ntBASIC16.93■□□□□ 0.3
TPM3P06753 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.93■□□□□ 0.3
TPM3P06753 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.93■□□□□ 0.3
TPM3P06753 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM3P06753 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.93■□□□□ 0.3
TPM3P06753 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.93■□□□□ 0.3
TPM3P06753 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM3P06753 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TPM3P06753 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms