Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD74P04233 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.68□□□□□ -0.38
CD74P04233 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 AC004870.1-201ENST00000315132 882 ntBASIC12.68□□□□□ -0.38
CD74P04233 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 AC004066.1-201ENST00000502488 802 ntBASIC12.68□□□□□ -0.38
CD74P04233 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.68□□□□□ -0.38
CD74P04233 AC025048.3-201ENST00000590609 569 ntBASIC12.68□□□□□ -0.38
CD74P04233 RN7SL828P-201ENST00000607615 303 ntBASIC12.68□□□□□ -0.38
CD74P04233 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.68□□□□□ -0.38
CD74P04233 AC005702.4-201ENST00000618393 416 ntBASIC12.68□□□□□ -0.38
CD74P04233 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CD74P04233 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.68□□□□□ -0.38
CD74P04233 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CD74P04233 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD74P04233 AC020658.7-201ENST00000624274 2442 ntBASIC12.68□□□□□ -0.38
CD74P04233 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD74P04233 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CD74P04233 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD74P04233 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 AC011840.2-201ENST00000563063 1520 ntBASIC12.67□□□□□ -0.38
CD74P04233 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.67□□□□□ -0.38
CD74P04233 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CD74P04233 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.67□□□□□ -0.38
CD74P04233 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.67□□□□□ -0.38
CD74P04233 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.67□□□□□ -0.38
CD74P04233 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.67□□□□□ -0.38
CD74P04233 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.67□□□□□ -0.38
CD74P04233 MIR6069-201ENST00000620069 79 ntBASIC12.67□□□□□ -0.38
CD74P04233 AF228730.6-201ENST00000641497 218 ntBASIC12.67□□□□□ -0.38
CD74P04233 AC084121.3-201ENST00000641716 218 ntBASIC12.67□□□□□ -0.38
CD74P04233 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.67□□□□□ -0.38
CD74P04233 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD74P04233 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CD74P04233 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD74P04233 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms