Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SAMD11P1-201ENST00000571429 661 ntBASIC13.61□□□□□ -0.23
HLA-DQA2P01906 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AP001160.2-201ENST00000596071 487 ntBASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AL844908.2-201ENST00000609461 460 ntBASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC005912.2-201ENST00000619492 2400 ntBASIC13.61□□□□□ -0.23
HLA-DQA2P01906 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 MTHFR-210ENST00000641407 2387 ntBASIC13.6□□□□□ -0.23
HLA-DQA2P01906 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 AL390754.1-201ENST00000619088 582 ntBASIC13.6□□□□□ -0.23
HLA-DQA2P01906 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HLA-DQA2P01906 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 METTL21AP1-201ENST00000438852 635 ntBASIC13.59□□□□□ -0.23
HLA-DQA2P01906 MEIS3P1-201ENST00000495167 958 ntBASIC13.59□□□□□ -0.23
HLA-DQA2P01906 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms