Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
MT-CO1P00395 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.47■□□□□ 0.07
MT-CO1P00395 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
MT-CO1P00395 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-CO1P00395 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-CO1P00395 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 AC022616.1-201ENST00000518688 554 ntBASIC15.47■□□□□ 0.07
MT-CO1P00395 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-CO1P00395 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 AL137783.1-201ENST00000623494 1896 ntBASIC15.47■□□□□ 0.07
MT-CO1P00395 RHOXF1P1-202ENST00000635473 501 ntBASIC15.47■□□□□ 0.07
MT-CO1P00395 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
MT-CO1P00395 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
MT-CO1P00395 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-CO1P00395 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-CO1P00395 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MT-CO1P00395 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-CO1P00395 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
MT-CO1P00395 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-CO1P00395 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-CO1P00395 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
MT-CO1P00395 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MT-CO1P00395 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 AC006001.1-201ENST00000325130 474 ntBASIC15.46■□□□□ 0.07
MT-CO1P00395 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-CO1P00395 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-CO1P00395 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-CO1P00395 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-CO1P00395 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 FO681548.1-201ENST00000455617 1132 ntBASIC15.46■□□□□ 0.07
MT-CO1P00395 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-CO1P00395 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-CO1P00395 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.46■□□□□ 0.07
MT-CO1P00395 RNA5SP486-201ENST00000515961 83 ntBASIC15.46■□□□□ 0.07
MT-CO1P00395 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.46■□□□□ 0.07
MT-CO1P00395 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-CO1P00395 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-CO1P00395 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-CO1P00395 AC004466.1-201ENST00000599515 1080 ntBASIC15.46■□□□□ 0.07
MT-CO1P00395 ECM1P1-201ENST00000604092 1279 ntBASIC15.46■□□□□ 0.07
MT-CO1P00395 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-CO1P00395 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MT-CO1P00395 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-CO1P00395 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
MT-CO1P00395 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
MT-CO1P00395 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.46■□□□□ 0.06
MT-CO1P00395 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.46■□□□□ 0.06
MT-CO1P00395 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms